2006 Ford Fusion Fuse Diagrams — Ricks Free Auto Repair The 2006 Ford Fusion, 2006 Lincoln Zephyr and 2006 Mercury Milan vehicles have two fuse box diagrams; the battery junction box located under the hood and the smart junction box located under the dash. There’s lots more information on this site for your vehicle. To find fuse diagrams, click here To find Relay locations, click here Fuse box Ford Fusion sedan 2006-2012 - fusesdiagram Fuse box in engine compartment Ford Fusion. The power distribution box is located in the engine compartment. The power distribution box contains high-current fuses that protect your vehicle’s main electrical systems from overloads.